| 2026, Cilt 42, e0473 |
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| Microbial Profile of traditional Dry-cured Meat: Metagenomic Analysis of Microbial Community of Kastamonu Pastrami Compared to Industrial Counterparts |
| Yasin Akkemik1, Eygi Feyza Bicak1, Alper Gungoren1, Ahmet Guner2 |
| 1Kastamonu University, Faculty of Veterinary Medicine, Department of Food Hygiene and Technology, Kastamonu, Türkiye 2Selcuk University, Faculty of Veterinary Medicine, Department of Food Hygiene and Technology, Konya, Türkiye |
| Keywords: Food safety, Kastamonu pastrami, Lactic acid bacteria, Metagenomics, Traditional meat products |
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This study provides the first metagenomic characterisation of Kastamonu pastrami,
a traditional Turkish dry-cured meat, and compares its microbial diversity with
industrially produced alternatives. The findings are evaluated regarding product
quality, fermentation characteristics, and food safety. We analyzed 15 sırt pastrami
samples (M. longissimus thoracis) from traditional producers A?D (n=12) and
industrial producer E (n=3). The 16S rRNA V3?V4 region was sequenced on Illumina
MiSeq and processed with standard quality-filtering/denoising and taxonomyassignment
workflow. Diversity metrics included alpha diversity (Shannon) and beta
structure (PCoA, hierarchical clustering); group differences were evaluated with
multiple-comparison procedures. Traditional products (A?D) showed higher alpha
diversity overall than the industrial group (E) (p<0.05). Shannon values were highest
in A and C with medians around ~2.10 and ~2.06 respectively; B was intermediate
(~1.88?1.90); D and E were lowest (~1,71 and ~1.65 respectively). Community
composition reflected these patterns; traditional samples contained producerspecific
lactic acid bacteria (LAB) consortia?Lactobacillus, Lactococcus, Weissella,
and Leuconostoc?while A and C also harbored hygiene/spoilage-associated genera
(e.e., Pseudomonas, Staphylococcus, Psychrobacter, Bacteroides, and Photobacterium).
The industrial group (E) exhibited low diversity with Lactobacillus dominance
(~80% relative abundance) and minimal non-LAB representation, consistent with
controlled fermentation and sanitation. Findings indicate a diversity?safety trade
off: traditional processing preserves microbial richness and typicity but may elevate
contamination risk without robust GMP/HACCP, whereas industrial processing
enhances microbiological safety at the expense of diversity. These results provide
a practical basis for targeted hygiene interventions that improve safety while
preserving the distinctive character of traditional pastrami.
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