2020, Cilt 36, Sayı 5, Sayfa(lar) 023-029 |
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Genomic organization of SARS-CoV-2 |
Ali Rıza Babaoğlu1, Seval Bilge Dağalp2, Fırat Doğan3, Gülizar Acar Kırmızı4 |
1Van Yüzüncü Yıl Üniversitesi Veteriner Fakültesi Viroloji Anabilim Dalı, Van, Türkiye 2Ankara Üniversitesi Veteriner Fakültesi Viroloji Anabilim Dalı, Ankara, Türkiye 3Hatay Mustafa Kemal Üniversitesi Veteriner Fakültesi Viroloji Anabilim Dalı, Hatay, Türkiye 4Atatürk Üniversitesi Veteriner Fakültesi Viroloji Anabilim Dalı, Erzurum, Türkiye |
Keywords: ACE 2, coronavirus, genome, replication, SARS-CoV-2 |
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The Coronaviridae family consists of two subfamilies Orthocoronavirinae
and Letovirinae. Orthocoronavirinae subfamily is examined in
4 different genus (genus) as alpha, beta, gamma and delta according
to their serological and genetic characteristics. Although the viruses
in the Coronaviridae family are enveloped, 80-220 nm in size and
pleomorphic, they mostly exhibit a spherical appearance. These viruses
have prominent and crown-shaped surface protrusions called
trimer spikes, 20 nm long. Since coronaviruses have a large RNA
genome, genomic changes such as mutation and recombination are
more common in these viruses. n particular, the fact that bat CoVs
can circulate in many different host species in nature may lead to an
increase in the rate of recombination and mutation and the emergence
of new pathogen CoVs. The reproduction of coronaviruses
takes place in the cytoplasm of the host cell. These viruses first attach
to cell surface receptors with S protein for replication. The main
determinant of CoV's ability to infect the host and tissue tropism is
the relationship between virus S protein and host cell surface receptor.
SARS-CoV-2 binds to different regions of angiotensin converting
enzyme-2 (ACE2). ACE2 is defined as an important cell surface
zinc-binding carboxypeptidase for cardiac function and balancing of
blood pressure. With the identification of SARS-CoV-2 as a etiological
agent of a new pandemic, it has once again aroused interest in
the molecular biology and pathogenesis of bat-borne coronaviruses.
These studies have produced a lot of functional and structural information
that can be used for the development of specific antiviral
agents and vaccines against SARS-CoV-2 in a very short time.
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